PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN00895.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 347aa    MW: 38889.5 Da    PI: 6.6606
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN00895.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.92.1e-14163209354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  KHN00895.1 163 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 209
                 79*************************9.....8****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.907160209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-12163209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.2E-14164216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-14164218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.3E-13166215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.42E-5173212No hitNo description
CDDcd048738.45E-7246299No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MIQEDQGQCS SQAINNYHQA YQEQLLLQQQ MQQQQQQQQQ NNDIFGGGLN MYPGGEVSQI  60
MHHHHHQPWS MTMPHHHHHH HQVHDPFLVP PQTSPYASLF NRRGPSLQFA YDHGSSSDHL  120
RIISESFVGP VVQPGSAPFG LQTELAKMTA QEIMEAKALA ASKSHSEAER RRRERINNHL  180
AKLRSLLPST TKTDKASLLA EVIQHVKELK RQTSLIAETS PVPTEADELT VVDEADEDGN  240
SVIKASLCCE DRSDLFPELI KTLKALRLRT LKAEITTLGG RVKNVLFITG EETDSSSSED  300
HSQQQQQCCI SSIQEALKAV MEKSVGDHHE SASANIKRQR TNIISMS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168173ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0958850.0BT095885.1 Soybean clone JCVI-FLGm-20E1 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001241119.10.0uncharacterized protein LOC100785826
SwissprotQ9S7Y14e-98BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A0B2NV270.0A0A0B2NV27_GLYSO; Transcription factor bHLH30
TrEMBLC6TE650.0C6TE65_SOYBN; Uncharacterized protein
STRINGGLYMA20G32660.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45893458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.16e-75bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]